Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03124 ATGTCCATATATACCGATAATAATCCACCACCGTTTCTTCCGGTTTCCTTTGACTCACCGAGTGAGCTGAAACAACCGCCAACGCCGATCCGCCTGTGGATCTTCGGGTACGGGCTGCAGTGCCTGCTGCACGTGGTGCTGGTGTGGCTCGAGTACCGCCGCCGGAACCAAAGGAATTCGCGGCGTCAGCGAAGGACGAGTGGCATAGAAAGCGAGGATGTTGATAGCTTTGAGGATGCCAACGATAGTGACGATGATGATGTTGGTGATGGAAACTCTTCTCACTCCGGATTCACAAAACGATGTGAGTCGTTTAATACGGGGATTTCATTCCTTTGGTGGATAGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATACTTCTGCAAGATGCCCCACGCTTATACTGGTTGGCTGTTGTGTTTTTGGCATTTGACGTCTTCTTTGCTATCTTTTGTGTTGTTTTGGCATGCTTAATTGGCATTGCCCTCTGTTGTTGTTTGCCTTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCGTCAGAGGCAGATCTCAGTATAATTCCAAAATACAGATTTGAAATTTTAAGCGATGAGGAAAAGCCTACTGGGGGAGCTGGGAGAATGGTTCCCATTGAAACCAGTAGTGGATATGTTGCAAACGAACGGACACTTTTGCCAGAGGATGCGGAATGTTGCATATGCCTTTGTCCTTACGAGGATGGAACAGAGCTCCATGCTCTTCCGTGCAATCATCATTTTCATTCTTTATGCATAGTGAAATGGCTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTACAATATTCTCAAAGGAAATGAACAAGTGTGA 864 0.4641 MSIYTDNNPPPFLPVSFDSPSELKQPPTPIRLWIFGYGLQCLLHVVLVWLEYRRRNQRNSRRQRRTSGIESEDVDSFEDANDSDDDDVGDGNSSHSGFTKRCESFNTGISFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIIPKYRFEILSDEEKPTGGAGRMVPIETSSGYVANERTLLPEDAECCICLCPYEDGTELHALPCNHHFHSLCIVKWLKMNATCPLCKYNILKGNEQV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03124 287 Pfam Ring finger domain 235 277 IPR001841 -
Adu05g03124 287 MobiDBLite consensus disorder prediction 61 97 - -
Adu05g03124 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 285 IPR013083 -
Adu05g03124 287 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 25 287 - -
Adu05g03124 287 MobiDBLite consensus disorder prediction 73 87 - -
Adu05g03124 287 SMART ring_2 236 276 IPR001841 -
Adu05g03124 287 SUPERFAMILY RING/U-box 223 281 - -
Adu05g03124 287 ProSiteProfiles Zinc finger RING-type profile. 236 277 IPR001841 -
Adu05g03124 287 PANTHER TARGET OF ERK KINASE MPK-1 25 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03124 Adu-Chr5 102334148 102346284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03124 24 286 C3H Transcription Factor Family AT1G68070 67.300 7.12e-130 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03124 05 102334148 102346284 Adu05g03124 05 102334148 102346284 ECH