Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04416 ATGGATGATGATATGTTGAACATGACCAATTGGGGATACTATGAACCCTTCAAAGGAGGGCATCTTGGCCTGCAGCTCATGCCTGGTATGACAGATCGTGACACAAAACCATTTATGCCTGGTCGTGATCCAACTATGTTAGTTAATACAAATGGAACCTTTCACCCTCGAGACTGTGTAGTTTCCGAAGCACAAATGCCAATCAACTATGTGAGGGATAGTTGGATAAGCCAGCGAGATAGGTTTTTCAATATGCAGCCTACCAATCCCAATTATCCTGTTCTTCCGGAAACTTCAGCCGCCCCAACACAAATTACACAGCCACCTGATACATCAAGAGATGAGAAGGCTGATATAGTTGAAGAAACAGTGCAAAAGGAAGGAGTCCAACCAAGGAAACGGCAGGGTAGGGTTGCCTCAACAACTCCAAAAGCGAAGAAACCAAGGAAGCCGAAGGATAACAGCAATGCTCCTGTCCAAAGATCGAAGCCCATGAAGACAATTGAGTTTGTAATAAATGGAATTGATATGGATATTTCCAGTTTACCCATTCCAGTTTGTTCATGTACCGGGACTCCGCAGCAGTGTTATCGCTGGGGATGTGGAGGATGGCAGTCTGCTTGTTGTACTACAAATGTGTCGACATATCCATTGCCAATGAGCATGAAACGACGTGGGGCAAGGATAGCTGGACGGAAAATGAGCCAGGGTGCTTTTAAGAAGGTATTAGAGAAACTAGCAGCCGAAGGCTATAATTTTGGTAACCCAATTGACCTGAGGAATCACTGGGCTAGACATGGCACCAACAAATTTGTCACTATCAGGTAG 828 0.4493 MDDDMLNMTNWGYYEPFKGGHLGLQLMPGMTDRDTKPFMPGRDPTMLVNTNGTFHPRDCVVSEAQMPINYVRDSWISQRDRFFNMQPTNPNYPVLPETSAAPTQITQPPDTSRDEKADIVEETVQKEGVQPRKRQGRVASTTPKAKKPRKPKDNSNAPVQRSKPMKTIEFVINGIDMDISSLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSTYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRNHWARHGTNKFVTIR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04416 275 Pfam GAGA binding protein-like family 1 275 IPR010409 -
Adu03g04416 275 SMART GAGA_bind_2 1 275 IPR010409 -
Adu03g04416 275 MobiDBLite consensus disorder prediction 87 110 - -
Adu03g04416 275 MobiDBLite consensus disorder prediction 87 165 - -
Adu03g04416 275 MobiDBLite consensus disorder prediction 111 133 - -
Adu03g04416 275 PANTHER - 1 275 IPR010409 -
Adu03g04416 275 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04416 Adu-Chr3 133174001 133176012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04416 1 275 BBR or BPC Transcription factor family AT2G01930 56.811 5.24e-102 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Adu03g04416 GAGA_bind 2.1e-101 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04416 03 133174001 133176012 Adu03g04416 03 133174001 133176012 ECH