Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01815 ATGGATGGACGGAATTTTCGCGCGATTGATTCACATTATGTATTTGACAGTTCTGAGGTGCGTTTCAGGCATGCTGGCCCTGTACCACACACAGGTCGGCAAATGTATCGACGCAATAGAAGAGGACTTTCCAGAACAACTCTTGGACGGGGAAATTTTCCTGCCATTGAGTTAGTCCAAGTTGATGGTGTCGCGGTGCTTGTTAATCATTATATAGACACGGAATTGCGCGTTGAAGATATGTCTTATGAGGGATTGAATGCATTGGGCCAGCAGATTGGCCATGTAAGCACTGGTTTATCAGAGGAAATAATAACCAATCAAATGAAGACAAAAACATATTTAATGGCTGCTAGTGCTGTTAATTTGGAGGAGGCAACTTCTCAGGAGGTAGAAGCTGATGTTTGTATAATATGCCAGGATGAATACAAGAACCAAGATATGATTGGAGTTCTTCAATGTGAGCATGAATATCATGCTGATTGTTTAAGGAAATGGTTGCTTGTGAGGAATGTCTGCCCCTTGTGCAAATCAGAAGCATTCATTCTAGGGGTGTAA 558 0.4211 MDGRNFRAIDSHYVFDSSEVRFRHAGPVPHTGRQMYRRNRRGLSRTTLGRGNFPAIELVQVDGVAVLVNHYIDTELRVEDMSYEGLNALGQQIGHVSTGLSEEIITNQMKTKTYLMAASAVNLEEATSQEVEADVCIICQDEYKNQDMIGVLQCEHEYHADCLRKWLLVRNVCPLCKSEAFILGV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01815 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 181 IPR013083 -
Adu03g01815 185 SMART ring_2 136 176 IPR001841 -
Adu03g01815 185 Pfam Ring finger domain 135 177 IPR001841 -
Adu03g01815 185 SUPERFAMILY RING/U-box 135 181 - -
Adu03g01815 185 ProSiteProfiles Zinc finger RING-type profile. 136 177 IPR001841 -
Adu03g01815 185 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 40 182 IPR045191 GO:0061630
Adu03g01815 185 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 40 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01815 Adu-Chr3 31238049 31238951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01815 33 181 C3H Transcription Factor Family AT2G15530 38.667 1.77e-29 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02421 07 78520562 78524214 Adu03g01815 03 31238049 31238951 PCT