Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01799 ATGTCATCGGTGAAGCAAATCGGAGTAGTGGGCGGCGGGCAGATGGGTTCGGGAATAGCGCAAGTGGCTGCTATGAATGGCATACACGTCTGCCTCTTCGATGTCGATCCTCCTGCTCTTTCCAAAGCCTCTGCTTCCGTCTCTGCCTCCATCGCTCGTTTGGTTTCCAAAGCTCAACTCTCTCAGTCTGAAGGTGCAGATGCTTTGCAAAGGGTGCGGTTTACATCAAATTTGGAAGACTTCCATCAGGCTGATTTTATCATAGAAGCCATTGTGGAATCTGAAGATATAAAGAAAAGATTATTACTTCAATTAGAAAAGATTGCCAAGAGTTCTGCAATTTTCGCGTCCAACACAAGTTCCATTTCCATAACTCGCCTAGCAGCTGCAACCAGCAGGCCACATCAGGTGATAGGAATGCATTTTTTCAATCCTCCTCCTGTGATGAAATTGATTGAGATTGTGCGAGGTGCACAAACTTCGGATGAGACATTCGCAGCTACAAAAGCATTGTCAGAAAGGCTCGGCAAGAAAGTAATAACCTCCCGGGACTTCTCAGGATTCATTGTAAACCGTATCCTTATGCCTATGATAAATGAAGCGTTTTTCGCCCTCTACACTGGCGTCGCAACCAAAGAGGACATTGACACTGGAATGAAGCTAGGCACTAACCATCCAATGGGTCCTTTACAACTTGCAGACTTCATTGGGTTGGACGTGTGCTTGTCAATAATGAAGGTTCTTCATGCTGGCCTTGGTGAAAACAAATATGCTCCATGCCCTCTTCTTGTGCAGTATGTCGATGCTGGCCGACTTGGAAAGAAACAAGGTATAGGGAAGAATAAGTTTGCTGGTGAAGGGGGAATAAAGAAGTGTGGCCTCGCCTATTTTGTACTGGTATCTTTTGGGGCATGCTCCCAAGTGCAGAGGTTGTTGAAATATGAGTGGAGATATTATTATTAG 963 0.4538 MSSVKQIGVVGGGQMGSGIAQVAAMNGIHVCLFDVDPPALSKASASVSASIARLVSKAQLSQSEGADALQRVRFTSNLEDFHQADFIIEAIVESEDIKKRLLLQLEKIAKSSAIFASNTSSISITRLAAATSRPHQVIGMHFFNPPPVMKLIEIVRGAQTSDETFAATKALSERLGKKVITSRDFSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLQLADFIGLDVCLSIMKVLHAGLGENKYAPCPLLVQYVDAGRLGKKQGIGKNKFAGEGGIKKCGLAYFVLVSFGACSQVQRLLKYEWRYYY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01799 320 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 184 IPR006176 GO:0006631|GO:0070403
Adu03g01799 320 ProSitePatterns 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 IPR006180 GO:0006631|GO:0016491|GO:0016616
Adu03g01799 320 PIRSF HCDH 1 287 IPR022694 GO:0006631|GO:0016616|GO:0070403
Adu03g01799 320 Gene3D - 190 291 IPR013328 GO:0016491
Adu03g01799 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 185 IPR036291 -
Adu03g01799 320 Pfam 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 279 IPR006108 GO:0006631|GO:0016491|GO:0016616
Adu03g01799 320 Gene3D - 2 189 - -
Adu03g01799 320 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 4 281 - -
Adu03g01799 320 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 4 281 - -
Adu03g01799 320 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 187 279 IPR008927 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01799 62 279 Acyl Lipid Metabolism Gene Families AT3G15290 75.688 1.50e-125 357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01799 03 30785742 30788207 Adu03g01799 03 30785742 30788207 ECH