Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01700 ATGATTAAGCCTTCGATGCTCAGATCCCTCCTCGTTGTTCTCGGGGCCGCCGGTGGCATCGGCCAGCCCCTATCCCTCCTCATGAAGCTCAACCCACTCGTTTCTAGCCTCTCCCTTTACGATATCGCCGGCACCCCCGGCGTCGCCGCTGATGTCAGCCACGTCAACACCAGATCTGAGGTCGCTGGATATCAAGGTGAAGGAGAGCTTGGAAAAGCTTTGGAGGGAGCTGACGTCGTTATAATCCCAGCTGGTGTTCCCAGGAAGCCTGGAATGACTCGCGATGATCTCTTCAACATTAATGCCGGCATTGTCAAGTCTCTGTGCACTGCTATTTCCAAGTACTGCCCCAAGGCCCTTGTTAACATGATTAGCAATCCTGTGAACTCCACTGTTCCCATTGCTGCCGAGGTTTTCAAGAAGGCAGGAACATATGATGAGAAGAGGTTGTTTGGGGTCACCACCCTTGATGTTGTTAGGGCAAAAACTTTCTATGCTGGAAAGGCCAATGTTCCGGTTGCTGGGGTCAATGTACCGGTTGTAGGTGGCCATGCAGGCATCACTATTCTGCCATTATTTTCTCAAGCAACACCGAAAGCCAATTTGGATCATGATGTCATAGTAGCTCTTACGAAGAGAACACAAGATGGTGGAACGGAAGTTGTTGAAGCCAAGGCAGGAAAGGGTTCTGCAACTTTGTCAATGGCCTATGCCGGAGCCCTCTTTGCCGACGCTTGTCTCAAGGGCCTCAATGGTGTCCCAGATGTTGTTGAGTGCTCATTTGTGCAATCTAATGTCACTGAACTTCCTTTCTTCGCTTCAAAGGTGAGACTCGGAAAGAACGGTGTGGAGGAAGTTCTGGGATTGGGGGCTCTTTCAGATTATGAGAAACAAGGCCTTGAAAACCTTAAGCCTGAGCTCTTGGCATCTATTGAGAAGGGAATCAAATTCGCCAAGCAATAA 963 0.4984 MIKPSMLRSLLVVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHVNTRSEVAGYQGEGELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAISKYCPKALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKANVPVAGVNVPVVGGHAGITILPLFSQATPKANLDHDVIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVVECSFVQSNVTELPFFASKVRLGKNGVEEVLGLGALSDYEKQGLENLKPELLASIEKGIKFAKQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01700 320 Gene3D - 154 320 IPR015955 GO:0003824|GO:0016616
Adu03g01700 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 152 IPR036291 -
Adu03g01700 320 PANTHER MALATE DEHYDROGENASE 11 319 - -
Adu03g01700 320 Gene3D - 10 153 - -
Adu03g01700 320 PIRSF Lac_mal_DH 6 318 IPR001557 GO:0016616|GO:0019752
Adu03g01700 320 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 154 317 IPR022383 GO:0016616
Adu03g01700 320 SUPERFAMILY LDH C-terminal domain-like 153 319 IPR015955 GO:0003824|GO:0016616
Adu03g01700 320 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 12 319 IPR010097 GO:0006099|GO:0030060
Adu03g01700 320 CDD MDH_glyoxysomal_mitochondrial 13 318 IPR010097 GO:0006099|GO:0030060
Adu03g01700 320 Pfam lactate/malate dehydrogenase, NAD binding domain 12 152 IPR001236 GO:0016491
Adu03g01700 320 PANTHER MALATE AND LACTATE DEHYDROGENASE 11 319 - -
Adu03g01700 320 ProSitePatterns Malate dehydrogenase active site signature. 153 165 IPR001252 GO:0006108|GO:0016615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01700 Adu-Chr3 28524790 28526777 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01700 03 28524790 28526777 Adu03g01700 03 28524790 28526777 ECH